EigenMS
Free Version
Publisher Description
EigenMS is a normalization method implemented in R (and older version in Matlab) available as a set of two functions that should be used in a sequence.
Please download EigenMS.zip file (latest version).
Latest version uploaded in October 2017 has a bugfix for single treatment group normalization.
Rescaling has been omitted from 2015.
EigenMS utilizes SVD to detect bias trends in the data and eliminates them. EigenMS eliminates effects from known and unknown factors and can be utilized for any -omic platform.
We have shown its utility in LC-MS/MS and metabolomics in the following two papers:
1) PMID: 19602524. "Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition".
Karpievitch YV, Taverner T, Adkins JN, Callister SJ, Anderson GA, Smith RD, Dabney AR.
Bioinformatics 2009
2) "Metabolomics data normalization with EigenMS"
Karpievitch YV, Nikolic SB, Wilson R, Sharman JE, Edwards LM.
PLoS One 2014
About EigenMS
EigenMS is a free software published in the Computer list of programs, part of Education.
This Computer program is available in English. It was last updated on 22 April, 2024. EigenMS is compatible with the following operating systems: Linux, Mac, Windows.
The company that develops EigenMS is yuliya. The latest version released by its developer is 1.0. This version was rated by 1 users of our site and has an average rating of 4.0.
The download we have available for EigenMS has a file size of 556.23 KB. Just click the green Download button above to start the downloading process. The program is listed on our website since 2017-10-24 and was downloaded 27 times. We have already checked if the download link is safe, however for your own protection we recommend that you scan the downloaded software with your antivirus. Your antivirus may detect the EigenMS as malware if the download link is broken.
How to install EigenMS on your Windows device:
- Click on the Download button on our website. This will start the download from the website of the developer.
- Once the EigenMS is downloaded click on it to start the setup process (assuming you are on a desktop computer).
- When the installation is finished you should be able to see and run the program.
